Either way, I dont think lifters should be replaced honestly.
But as ^ questions, perhaps exhaust mods might be in order?
However I'm of the opinion that there are no "perfect" header solutions, only compromises.
They all have problems or sacrifice on certain aspects, there is a header/manifold thread that is stuck somewhere that covers this.
Edit: see you just posted, PCM: worthless, Downpipe eh, stock downpipe on newer cars isn't as bad as old ones, might not be worth the cost/effort, t-stat is a bandaid, plugs is fine for that pulley, but you'll want more exhaust mods than just a downpipe.
Consider a plog as well if you don't want to go headers.