if it wasnt doing this before it sat up for a year and a half... i would think somethin is probably gunked up in valve body... try a can of seafoam trans tune. follow directions on can.
u can "TRY" resetting the PCM. not sure if it will help. but worth a shot.. disconnect battery for an hour or so... reconnect and see if it still does it. if its got 1500 miles on rebuild id doubt its the filter. but seafoam trans tune is good stuff... has cleared up issues for me before.